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Integration of genomic, phenomic, and environmental data for georeferenced plants


Long-lived and sessile plant species serve as ideal models to assess population structure and adaptation to the environment. Despite the availability of comprehensive data, the researchers who study them are challenged to integrate data describing genotype, phenotype, and the environment. Towards this goal, the web application CartograTree (now known as CartograPlant), was designed and implemented as an open repository and open-source analytic web-based framework for all three.

Browse or search CartograPlant here
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Detailed documentation, tutorials and resources

Current Data Submission Leads!

Place
Name
Submissions
Trees
Country
1
Charles Demurjian
99
92664
United States
2
Isaac McEvoy
24
11805
United States
3
Barnaly Pande
8
5947
United States
4
Stephen Duncanson
4
1110
United States
5
Emily Strickland
4
27603
United States

2021 Competition

Submit your studies today! Competition ends July 26th 2021!
Prize 1
CartograPlant travel mug, TreeGenes portable charger, magnets, stickers, bag, and an opportunity to talk with the developers about new features.
Prize 2
CartograPlant travel mug, stickers, pen, and bag.
Prize 3
CartograPlant travel mug, stickers, pen, and bag
All participants
CartograPlant stickers and magnet.
CartograPlant Dashboard
Plants

Species

Genera

199

Countries

43

Studies

Genotypes

25,839,892

Phenotypes

1,146,698

The Development and Use of Isoscapes to Determine the Geographical Origin of Quercus spp. in the United States, Genomic evidence of introgression and adaptation in a model subtropical tree species, Eucalyptus grandis, Range-wide assessment of a SNP panel for individualization and geolocalization of bigleaf maple (Acer macrophyllum Pursh), Diversity, genetic structure, and population genomics of the tropical tree Centrolobium tomentosum in remnant and restored Atlantic forests

BIEN

Plants 8,191,637 Species 65
Genera 29

TREESNAP

Plants 9,102 Species 130
Genera 51 Phenotypes 63,610
Charles Demurjian with 92664 plants
Isaac McEvoy with 11805 plants
Barnaly Pande with 5947 plants
Stephen Duncanson with 1110 plants
Emily Strickland with 27603 plants
Pinus jeffreyi
Pinus glabra
Pinus flexilis
Pinus elliottii
Saved sessions
8
827
Salix purpurea x Salix helvetica
Salix helvetica
Metrosideros waialealae var. fauriei
Metrosideros waialealae var. waialealae
N/A