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Integration of genomic, phenomic, and environmental data for georeferenced plants


Long-lived and sessile plant species serve as ideal models to assess population structure and adaptation to the environment. Despite the availability of comprehensive data, the researchers who study them are challenged to integrate data describing genotype, phenotype, and the environment. Towards this goal, the web application CartograTree (now known as CartograPlant), was designed and implemented as an open repository and open-source analytic web-based framework for all three.

Get Started
Browse or search CartograPlant here
Submit
Submit data for analysis
User Guide
Detailed documentation, tutorials and resources

Current Data Submission Leads!

Place
Name
Submissions
Trees
Country
1
Charles Demurjian
99
92664
United States
2
Isaac McEvoy
24
11805
United States
3
Barnaly Pande
8
5947
United States
4
Stephen Duncanson
4
1110
United States
5
Emily Strickland
4
27603
United States

2021 Competition

Submit your studies today! Competition ends July 26th 2021!
Prize 1
CartograPlant travel mug, TreeGenes portable charger, magnets, stickers, bag, and an opportunity to talk with the developers about new features.
Prize 2
CartograPlant travel mug, stickers, pen, and bag.
Prize 3
CartograPlant travel mug, stickers, pen, and bag
All participants
CartograPlant stickers and magnet.
CartograPlant Dashboard
Plants

Species

Genera

199

Countries

43

Studies

Genotypes

26,072,325

Phenotypes

1,317,740
Genomic diversity, population structure, and migration following rapid range expansion in the Balsam Poplar, Populus balsamifera, Evolution in situ: hybrid origin and establishment of willows (Salix L.) on alpine glacier forefields, Influence of northern limit range on genetic diversity and structure in a widespread North American tree, sugar maple (Acer saccharum Marshall), The Development and Use of Isoscapes to Determine the Geographical Origin of Quercus spp. in the United States

BIEN

Plants 8,191,637 Species 65
Genera 29

TREESNAP

Plants 9,102 Species 130
Genera 51 Phenotypes 63,610
Charles Demurjian with 92664 plants
Isaac McEvoy with 11805 plants
Barnaly Pande with 5947 plants
Stephen Duncanson with 1110 plants
Emily Strickland with 27603 plants
Thuja plicata
Taxodium distichum
Sequoiadendron giganteum
Sequoia sempervirens
Saved sessions
8
854
Eucalyptus grandis x Eucalyptus urophylla
Salix purpurea x Salix helvetica
Salix helvetica
Metrosideros waialealae var. fauriei
N/A